Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803504.1_cds_XP_016484726.1_7558
CDS Infomation

[gene=LOC107805240] [db_xref=GeneID:107805240] [protein=peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like] [protein_id=XP_016484726.1] [location=join(39127..39269,39340..39464,39818..39864,39938..40015,40106..40230,40369..40426,40534..40596,40951..41020,41136..41236,41460..41564,41668..41847)] [gbkey=CDS]
Sequence

ATGGCAGGTGAAGCAGTTAATGTGAATGAATTTCAAGAGCTAGCTAAGCAAGCTCTTCCA
AAGATGTACTATGACTTCTTTGCTGGAGGAGCTGAGGATCAGTATACACTAAATGAAAAT
ATAGAAGCATTTCGTAGAATCACTATTAGGCCAAGAATACTTGTTGATGTGAGCAGAATA
GACATATCAACTGTTATACTCGGTCACAAGACGTCGGCTCCCATTATGGTTGCCCCAACT
TCCTCACATCAATTGGCACATCCTGAAGGGGAAGTTGCAACAGCTAGAGGTGCTGCAGCA
TGTAATGTTATCATGGGATTGTCATTTACGGCCACATGCACCATTGAGGAGGTTGCTTCA
AGCTGCAACGCTGTTCGCTTCTTCCAAACATATGTTTACAAAAGGAGAGATATAACCGAA
CTTATGGTACACAAAGCTGAGAGCAATGGATTCAGGGCTATAATTCTCACTGCTGATACT
CCAAGGCTTGGCAGAAGGGAGGCTGATATAAAGAATAAGATGATTTCACCTCGGTTGAGG
AACTTTGAAGGTCTTATAACAACTGAAGTAGTTTCTGACAAGGGCTCAAATCTTGAAGCA
TACGCTGCAGGAACTCTTGATCCTTCGCTTTGCTGGAAGGATATAGTGTGGTTAAAATCA
GTTACCAAGTTGCCAATTCTGATTAAGGGCGTTCTCACTGGTGAAGATGCAATAAAAGCA
GTTGAAGCAGGAGTTGCAGGAATTATTGTCTCTAACCATGGAGCTCGGCAACTAGATTAT
ACTCCAGCTACTATTTCTGTTCTTGAAGAGGTGGTCAATGCTGTTCAAGGCAAAGTTCCA
GTTCTTCTTGATGGAGGAATTAGGCGAGGAACAGACATATTCAAGGCGTTAGCACTTGGC
GCAAAAGCTGTTCTGATTGGTCGACCGATTGTCTATGGACTGGCCACTAAGGGAGAGTCT
GGGGTAAAGCAAGTCATTGAAATGCTGAAGAATGAACTTGAGCAGACCATGGCGCTTGCT
GGCTGCTGCAATGTGAATGACATAACCAGAAGCCATGTTAAGACAGAGAAAGAAAGGTTC
CTTTGTAGGATGTAG

Peptide Sequence

PEP ID

XP_016484726.1
PEP Infomation

PREDICTED: peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [Nicotiana tabacum]
Sequence

MAGEAVNVNEFQELAKQALPKMYYDFFAGGAEDQYTLNENIEAFRRITIRPRILVDVSRI
DISTVILGHKTSAPIMVAPTSSHQLAHPEGEVATARGAAACNVIMGLSFTATCTIEEVAS
SCNAVRFFQTYVYKRRDITELMVHKAESNGFRAIILTADTPRLGRREADIKNKMISPRLR
NFEGLITTEVVSDKGSNLEAYAAGTLDPSLCWKDIVWLKSVTKLPILIKGVLTGEDAIKA
VEAGVAGIIVSNHGARQLDYTPATISVLEEVVNAVQGKVPVLLDGGIRRGTDIFKALALG
AKAVLIGRPIVYGLATKGESGVKQVIEMLKNELEQTMALAGCCNVNDITRSHVKTEKERF
LCRM

Transcript Sequence

Gene sequence data has not been registered.